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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … on the backs of people who’ve done a lot of work over the years. We have a pretty good idea of what the different …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … multiple projects of different types which can span several years. Projects are defined at proposal acceptance and may …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

To expand access to integrated data, improve tools and infrastructure as well as ensure … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … Microbial Genomes and Plasmid Resources … Genomes Online Database … National Microbiome Data Collaborative … …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, … … Integrated Microbial Genomes — Virus Resources … Genomes Online Database … Microbial Program in Detail … Projects and …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … or NPAtlas, a freely accessible natural products structure database, which is going to be just invaluable to the … microbial natural products in an ordered way for perhaps 80 years. And in that time, we have discovered many thousands …

… batch of episodes that I did at the SIMB meeting … two years ago? Yeah, it would be two years ago.  NIGEL MOUNCEY: … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five years, working through two journal contracts for the …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … time. So they had actually sequenced the genome a number of years earlier as one of the first Streptomyces genomes that … is, where do you think your lab is going over the next say five or 10 years? Sounds like function is a big part of …