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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Microbiol Resour Announc.  … Objectives … What is IMG/M … Publications … Access to the microbial genomes and …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … the functional capability of microbial communities based on their metagenome sequence, in the context of …

The Metagenome Program uses advanced sequencing technologies to … archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and … pathways, enabling modeling of microbiomes based on functional traits. These advancements provide new …

Research in the Woyke laboratory focuses on the utility of … highlights our skewed understanding of microbial metabolism towards a minority of cultivated bacteria, still persists to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … DNA synthesis and pathway engineering Mass spectrometry based metabolomics Below is a table of standard product … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

Our research is focused on the discovery and characterization of … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … Nature Communications. 9 (1), 1-9 Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. …

Biology is currently experiencing a revolution brought on by rapid developments in genomics … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Microbes drive critical ecosystem functions and affect global nutrient cycling, … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

Our data platforms are a key resource for the broader scientific … of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … the functional capability of microbial communities based on their metagenome sequence, in the context of …