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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … IMG/M provides data and tools via a graphical user interface, so no programming knowledge and no dedicated …

… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … somewhat by like just the fatty acids or whatever the precursors that are available to the cell, right? AARON … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … We are located in the Integrative Genomics Building in the heart of the Berkeley Lab campus, atop the hills above … terrestrial, subsurface, and terrestrial-aquatic interface ecosystems. JGI also focuses on projects that aim …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … around, talking about a subject that’s near and dear to my heart. And that is, we wanted to do a primer episode on … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… collaborate with users to develop project requirements, define the scope of work and outline roles and responsibilities … the JGI is initiated via the Work Initiation Process (WIP) interface. To submit a proposal, users must first log in … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … metadata is collected via spreadsheet or directly via a web interface prior to shipping samples to the JGI. PI sends …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genomes and mobile genetic elements, linked to custom interfaces and visualization tools for user analysis. …

… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about …