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… With collaborative user projects, the JGI’s Plant Program … with other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …    Authorship Guidelines JGI will provide all users with a list of JGI staff who contributed to their project, …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial … single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … of their bacterial host to colonize plant roots, as with Arabidopsis thaliana. Using a coupled experimental and …

… The Metagenome Program uses advanced sequencing technologies to … bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing … The Metagenome Program focuses on the high-throughput sequencing of …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … educators from a broad range of disciplines up-to-speed with some of the latest developments in microbial genomics, …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …

… Non-Proprietary User Agreement and Appendix. An Appendix identifies the type of work or specific proposal to be … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … your Host Institution and LBNL is required. NOTE:  If a PI changes academic institutions or a new PI is named during …

… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … as well as microbial and plant responses to environmental changes. With advanced mass spectrometry techniques and …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …