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… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, …

… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy …

… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and … their potential applications in the bioeconomy including biofuels, biochemicals and sustainable agriculture. …

… and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … biosynthetic chemistry. It’s some fun topics, and I think you’ll enjoy it! So, that’s this episode. I still have … at all of these different putative biosynthetic gene clusters in your organism that you love dearly and can …

… and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene cluster families. And he tells us about forthcoming efforts … Takemura: Yeah. Crashing. Maybe it’s what I’m used to thinking of, like someone crashing at someone else’s place. OK. … tools for exploring secondary metabolite biosynthetic gene clusters (BGCs). Most people in the field are going to …

… at naturalprodcast.com — I went a little overboard with links on this, since I’m hoping this episode and the … bit more into fungi and learning the differences of all the genetic differences and then expanded on on that knowledge … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for … A primary purpose of this project is to bring educators from a broad range of …

… Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural … the active site of an enzyme. So there is no promiscuity, generally speaking, in primary metabolism. Nevertheless, … are actually are constructing a BGC, a Biosynthetic Gene Cluster. So we do have enough data, and if you follow them, …

… the interview, I’d encourage you to come check out the links to some cool papers in the show notes, which you can … It was unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a year, a … Pathway of Everninomicin D Antibiotics and Analogues” And links to the abstracts for the SIMB posters we mentioned at …

… As always, you’ll find transcripts and show notes with links to lots of other resources, especially for these primer … ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … complexity, and encode for a treasure trove full of novel genes ready to be tapped for downstream applications. …