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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model … and metabolomics data, shedding light on microbial metabolism and activity in natural environments. Integrating …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

The IMG group owns and maintains integral components of JGI’s production workflow, … and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … or MAGs. So these are genomes that were assembled from metagenomic sequence, metagenomic sequence being taking a …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … for that. So, first of all, we were approaching it on the basis of the available data that is out there. So let’s … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … on new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … products and the science and scientists of secondary metabolism. As the JGI acts on its goals in — and builds out …