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… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … searches to expand representation of uncultivated microbial lineages. Charting viral ‘dark matter’:   Viruses are …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … and include proposal Award DOIs following the guidelines below.  … If you use data from 3 or fewer JGI …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … genome sequencing of underexplored bacterial and archaeal lineages that are important for bioeconomy applications. By … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …

Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

Below is a brief description of the process needed to prepare and ship samples for … reports and tracking statuses.  Please follow the steps outlined below. Click the drop-downs to learn more about each … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … state-of-the-art data processing and analysis pipelines for the interpretation of microbiome omics data …

… project requirements, define the scope of work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

The JGI Project Management Office carries out a number of activities to facilitate … PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working with our facility. This includes help with: preparing a …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … PhycoCosm portal. The Fungal & Algal Program aims to streamline genome analysis workflows for microbial eukaryotes, …