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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … climate and soil conditions around the globe to identify genes to improve our domesticated species.  The program … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … Z. & Rubin E.M. Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science 331, 463-7 (2011). … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … the next question is, which is this direction? What is the fate? It could be catabolism, for degradation of … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … simiae WCS417. One suggested function of these phage genes is the modulation of their bacterial host to colonize … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … in most fungi, biosynthetic gene clusters, which are the genes that do the biosynthesis of a secondary metabolite, …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many genes after such events, returning their genomes to a …