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The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

… structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …

Procedure GenTegra RNA Preparation Procedure … 1) Complete Sample Metadata form Sample metadata is collected … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … pipelines.  You will receive automated emails as raw sequence data becomes available, and as analysis is …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … what looked to be novel biosynthetic gene clusters, like completely new things that we haven’t seen before. And so …

The Fungal & Algal Program Advisory Committees is chartered by the Science Program Heads and report back to them. The Committee is chartered to render advice, … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key …

… sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

The JGI Project Management Office carries out a number of activities to … PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana …

The program also collaborates with isolate collections to complete large-scale sequencing projects, including 10,000 … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from …