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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …
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Publications
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Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants
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Natural Prodcast Episode 17: Cassandra Quave
… is Professor Cassandra Quave from Emory University, with joint appointments in the School of Medicine and College of … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … in the library now. It’s unique in that it is highly targeted towards, again, plants that are used in traditional …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Plant-Microbial Interactions Group
… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … supernatant and send that to back to JGI and have them do untargeted metabolomics, which we can then using some tricks … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Secondary Metabolites Program
… algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … interactions with their environments and with each other, from defending against predators to aiding in symbiotic …
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