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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, … and skills necessary to extract meaningful biological insights from sequence data, employing IMG data and tools …
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Publications
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Microbial Program
… cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … The program provides high-quality, large-scale genomic data to advance microbial research that drives … interactions: In an effort to gain insights into the interactions between microbial organisms and how …
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Metabolomics Program
… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, … metabolomics with genomic data to gain insights into how small molecules function within plants, microbes, …
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Metagenome Program
… that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, with … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … NRPS A domains. (Dan’s favorite review on NRPS structural biology is here ) And so we talked about …
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Single Cell Research Group
… means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Environmental Genomics Group
… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Plant Program
… and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … the exploration and identification of small and large structural variation — this variation drives major … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from uncultivated genomes of the global human gut … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Mission
… program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … managing our people and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL … strains, or enzymes to convert plant biomass components into fuels, chemicals, and bioproducts, or to control …
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