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Publication Policy
… while also adhering to the authorship policies of the journal in which the research is published. The JGI expects … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Science Program lead(s) to discuss authorship at any point. Specifically, Users are encouraged to discuss authorship …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other bioenergy … It The program fosters collaboration with U.S. and international scientists to drive innovations that align with …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the … material is one of the greatest predictors of a successful sequencing project. It is imperative that users properly …
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Institutional User Agreements
… any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for … and Appendix. An Appendix identifies the type of work or specific proposal to be covered under the Agreement. The … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Publications
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Industry Engagement Program
… Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government … joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … Industry Partners access to our vast set of resources:  JGI sequencing technologies include scaling technologies and …
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Protocols
… Find protocols provided by JGI and the JGI user community … preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here … RNA Extraction Protocols: …
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Strand-Specific RNA-Seq Analyses of Fruiting Body Development in Coprinopsis cinerea
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Workforce Development & Education Outreach
… Outreach at JGI takes many forms: We offer internship opportunities through working directly with specific universities, continuing education programs in the … The JGI and UC Merced have had a long-standing internship partnership that started in the summer of 2014. …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of …
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Analyze Data
… the high-quality data we generate, tools like artificial intelligence can empower the global research community.   We … The JGI is involved in efforts to integrate data in support of new research questions that span domains. We also work with our partners to build infrastructure in support of new analysis techniques.  …
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