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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … responses. The program employs advanced mass spectrometry-based methods to analyze metabolites from a wide range of … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological … advanced liquid chromatography mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products … abundance of identified metabolites and unidentified features in spectra. 167/214 Metabolomics Non-polar …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze data on scales ranging from single genes and individual genomes to metagenomes to …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … issue, we realized that the only really intrinsic feature of secondary metabolism, which will not change over … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … of inclusion, there’s certain countries that are always featured in natural products and actinobacteria research. …

… synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … accepted proposals, sequencing, synthesis, metabolomics and analysis will be performed by the JGI at no cost to the … more customized analysis, the JGI also participates in publication of results. See more details on our Review …