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… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. A … Jean-Marie Volland: Assistant Professor, UC Santa Barbara Esther Singer: Director of Product …

… the JGI’s focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end … automation — and further advancing sequence applications, single cell genomics, biodesign, and metabolomics capabilities.    … An assay used for profiling transcription factor binding sites across entire …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding … of bacteria and archaea in their natural environments using single cell approaches. This includes linking strain-level …

… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …    Authorship Guidelines JGI will provide all users with a list of JGI staff who contributed to their project, …

… technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team  … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes … measure environmental microbiome activity levels.This functional assay lets us move beyond cataloging the genes of …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … possess genomes and particle sizes that rival those of cellular organisms. Giant viruses challenge the traditional …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an … provides customized analysis, the JGI also participates in publication of results. …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … predict or just understand better the language of microbial cell-cell communication. And he told us about his work in … and they were able to synthesize the genes for every single one of those and put them in individual plasmids and …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond … activity measurements, such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, …

… faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of …