Skip to main content
Logo
Logo Logo

Header Utility Nav

  • Mission
  • Science Programs
  • Who We Are
  • Data Policy & Support
  • Contact

Main navigation

  • Analyze Data
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • User Programs
      Learn more about our proposal calls
    • Offerings & Capabilities
      Learn how the JGI can advance your science
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Our podcast features users discovering the expertise encoded in our environment
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Main navigation

  • Analyze Data
    • Menu
    • JGI Portals
      All the data we generate are publicly available
    • Data Ecosystem
      Meet our data partners
    • How to Use Our Systems
      Learn more about navigating JGI portals
  • Work With Us
    • Menu
    • User Programs
      Learn more about our proposal calls
      • CSP Overview
      • FICUS Overview
      • Special Initiatives & Programs
      • Partnerships Development Team
    • Offerings & Capabilities
      Learn how the JGI can advance your science
      • Products
      • Sequencing
      • Synthesis
      • Metabolomics
    • Educational Partnerships
      Empowering the next generation of researchers
    • Events
      JGI-hosted meetings, seminars, workshops and more
  • User Stories
    • Menu
    • Science Stories
      Read about JGI-enabled user research
    • Genome Insider
      Our podcast features users discovering the expertise encoded in our environment
    • Announcements
      The latest news on new users, projects and JGI scientists
    • Publications
      Search user publications by year, program and proposal type
    • Approved Proposals
      Find a list of previously-accepted proposals

Header Utility Nav

  • Mission
  • Science Programs
    • Menu
    • DNA Synthesis Program
    • Fungal & Algal Program
    • Metabolomics Program
    • Metagenome Program
    • Microbial Program
    • Plant Program
    • Secondary Metabolites Program
  • Who We Are
    • Menu
    • Leadership
    • Program & Platform Leads
      • Environmental Genomics
      • IMG Group
      • Metabolomics Technology
      • Micro-Scale Applications
      • Microbiome Data Science
      • New Lineages of Life
      • Plant Microbial Interactions
      • Single Cell Research
      • Strain Engineering
      • Synthetic Biology Informatics
      • Synthetic Biology Lab
      • User Support Analysis
      • Viral Genomics Group
    • Committees
      • JGI User Executive Committee
      • Scientific Advisory Committee
      • DNA Synthesis Science User Advisory Committee
      • Fungal & Algal Program User Advisory Committee
      • Informatics Advisory Committee
      • Plant Program User Advisory Committee
      • Prokaryote Program User Advisory Committee
      • Secondary Metabolites Advisory Committee
  • Data Policy & Support
    • Menu
    • Project Management Office
    • Data Policy
  • Contact

Error message

The page you requested does not exist. For your convenience, a search was performed using the query publication single cell genomics reveals features of a colwellia species that was dominant during deepwater horizon oil spill.

Breadcrumb

  1. Home
  2. Search

Search

Results


Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
Learn more
Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …
Learn more
Microbiome Data Science Team
… types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a metagenome-assembled … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
Learn more
Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …
Learn more
New Lineages of Life Group
We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
Learn more
Viral Genomics Group
… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … mechanisms involved in virus:host interaction and host cell take-over by viruses, and attempts to evaluate … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
Learn more
Publications
Learn more
Natural Prodcast Episode 13: Francisco Barona Goméz
I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … for example, in terms of the stereochemistry, such that single changes can lead to a particular high activity … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
Learn more
Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill
Learn more
Natural Prodcast Episode 4: Nancy Keller
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … parasite you really can’t grow well. You have to have it in cell culture. So we are going to see if we can express that … alone – I’m interested in pathogens. It’s just never a single microbe. And we have several recent papers and are …
Learn more
Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … learning, because it feeds on so much data, right, to learn features of interest. And so, because that it’s such a fuzzy …
Learn more
Natural Prodcast Episode 7: Ben Shen
… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … is always associated with toxicity, basically, killing cells. ALISON: Right, because they’re so reactive. BEN: … DAN: Yeah, I don’t think your lab is gonna tackle that single handedly, right? So, yeah, getting the community …
Learn more

Pagination

  • Page 1
  • Page 2
  • Page 3
  • Page 4
  • Page 5
  • Page 6
  • Page 7
  • Page 8
  • Page 9
  • …
  • Next page ››
  • Last page Last »
Logo
  • LinkedIn
  • X
  • Bluesky
  • Youtube
Subscribe to our Newslettermail icon

JGI Footer

  • About
  • Contact
  • Careers
  • Media

Analyze Data Footer

  • Analyze Data
  • JGI Portals
  • Data Ecosystem
  • How to Use Our Systems

Work With Us Footer

  • Work With Us
  • User Programs
  • Offerings & Capabilities
  • Educational Partnerships
  • Events

User Science Footer

  • User Stories
  • Science Stories
  • Genome Insider
  • Announcements
  • Publications
  • Approved Proposals
© 1997-2025 The Regents of the University of California

JGI Footer Utility

  • Disclaimer
  • Accessibility / Section 508 Statement
  • Archives
  • Site Feedback
Logo

Berkeley Footer

  • Contact
  • Visit Us
  • Subscribe
  • X
  • LinkedIn
  • Instagram
  • Facebook
  • Youtube
Logo
Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.

Berkeley Footer Utility

  • Staff Directory
  • For Employees
  • Emergency Status
  • Privacy & Security Notice
  • Site Feedback