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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … of collaborators and users. For example if, by agreement with the collaborator, JGI staff take a lead role in the …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … of novel metabolites, genes, and proteins. It also enables exploration of energy and nutrient exchange, as well … and plant responses to environmental changes. With advanced mass spectrometry techniques and computational tools, the …

… faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … families. And it does that by not relying on sequence alignments while still taking into account sequence … and metabolome data, and biosynthetic gene clusters, and tandem mass spectra. So that you would actually document …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … not only simplifies and streamlines this process, but enables scientists to conduct fundamental science … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … vs non-syn aa change etc) and structural rearrangements, alignment files 384/454 Fungal Transcriptome RNA for … metabolites using normal phase chromatography coupled to tandem mass spectrometry Metabolite annotation based on …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, and other techniques. … APS …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … been a pioneering effort in functional genomics since 2012, with a focus on addressing critical energy and environmental … innovative research in synthetic biology, the program enables the design and synthesis of complex genetic pathways …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … the advent of two dimensional NMR and high resolution mass spectrometry. And so some of those stories percolate … from UCSD, which is doing pattern recognition in comparing spectras to one another. And community-based resources which …

… system behavior.  Through this identification, metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse biological … environmental samples using advanced liquid chromatography mass spectrometry (LC-MS) based methods in combination with …