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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi … to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … The Fungal & Algal Program harnesses cutting-edge sequencing technologies and advanced genomic …
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Publication Policy
… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the research is published. The JGI expects that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism … uncultivated Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses … metatranscriptomics, to metagenomics and metabolomics data, shedding light on microbial metabolism and activity in …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties encoded … to explore the genetic makeup of microbial communities, shedding light on their roles in various environments and …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … pinene – if you go to the forest, you have this very refreshed feeling, right? That’s the flavor of monoterpenoids. The very light natural product that gives you this fresh scent of the …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … where the hills, as it rained or whatever, any water that washed down off the hills might carry small pieces of gold … but then there will be a couple of genes in there where the light bulb will go off, and you’ll understand, oh, those …
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Publications
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … what JGI does, which is sequence genomes. And we just published last year in the Nature Chemical Biology — or early … move a little bit away from that to try to unmask chemical dark matter. And the idea behind this is that, if we …
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Fungal & Algal Program User Advisory Committee
… The Fungal & Algal Program Advisory Committee is chartered by … on the effective management and strategic objectives of the Program. The Committee serves as the Program's key external advisory panel and advocates of Program strategy, operations, and scientific relevance …
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