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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. …

Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole … merit Assembly, annotation ( Mycocosm ) 256/404 Fungal Resequencing SNP and short indel calls, rearrangement …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … Genomes & Microbiomes system ( IMG/M ) supports the annotation, comparative analysis, and distribution of …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … advanced tools, including deep learning algorithms for gene annotation and protein folding models, to improve the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The …

Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … genomes the program offers single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … serves as a community resource for comparative analysis and annotation of all publicly available genomes from three …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … gene transfer. … The SMC provides complete sequence and annotation data for secondary metabolite biosynthetic gene …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … its major branches for users to characterize and propagate annotations across fungi. Myco-Ed Genomics Initiative   …