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Publication Policy
… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … responsibility for leading the efforts to do so, and JGI expects acknowledgment (see Auspice Statement below) for the …
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CSP Large Scale Call
… critical minerals and materials, inter-organismal interactions, and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program missions .  While … and analytical capabilities. All proposals will be externally peer-reviewed for scientific merit, DOE mission …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … of microbial communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics … microorganisms. This process enables our users to explore the genetic makeup of microbial communities, shedding …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … use a variety of genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics …
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QTL × environment interactions underlie adaptive divergence in switchgrass across a large latitudinal gradient
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Publications
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to empower them with the knowledge and skills necessary to extract meaningful biological insights from sequence data, …
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Plant Program
… natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying … soils, interacting with other organisms, and adapting to environmental changes. The program lays the groundwork for … major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable energy …
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Microbial Program
… sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying … of terrestrial biogeochemical cycling and inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as improving soil health, …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … these compounds are biosynthesized and their roles in the environment, can unlock new avenues for bio-based products …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding … Exploring the fascinating world of giant viruses, which …
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