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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of … means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … technology in order to enhance the quality of single-cell genomes and directly link functional information … activity (BONCAT+FACS). To provide additional functional insights into microbial genomes, the JGI now uses laser …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genomics, metagenomics, and computational biology, and to empower them with the knowledge and skills necessary to …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … data driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial …
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Publications
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … efforts of the group have concentrated in demonstrating the power of data science in tackling grand challenges in … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly describing the project …
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Power in isolation: insights from single cells
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … natural product – they also often surprise us by giving us insights, inspires us to discover the fundamentals and then … Nobel Prize in the 40s. Then Samuel Waxman taught us the isolation of streptomycin from Actinomyces taught us that …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, … regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … conversation with Aaron Puri. He is an Assistant Professor from the Chemistry department at the University of Utah, so … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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