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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … the genomes of these organisms, the program investigates the biological mechanisms that enable fungi and algae … Program harnesses cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all … to a research project are appropriately recognized and credited for their work, while also adhering to the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to …
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PMR5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of the latest …
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Secondary Metabolites Program
… JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … The Secondary Metabolites Program targets the vast and underexplored reservoir of secondary metabolites …
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Publications
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Fungal & Algal Program User Advisory Committee
… Committee is chartered by the Science Program Heads and report back to them. The Committee is chartered to … guidance, and counsel on the effective management and strategic objectives of the Program. The Committee serves as the Program's key …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … Plant microbiomes hold the amazing ability to influence plant … and health. This is a dynamic and complex ecosystem that includes bacteria, fungi, viruses. Resident viruses can …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … easy to search for because there are patterns of domains, protein domains that you look for. And if you find those all …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … and evolution. So, yeah, that sounds like we’ll have some intersection the future. Great. ALISON: Oh, I guess I have a …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon … more structural diversity — so that one uses acyl carrier proteins as co-substrate. So the other ones they use CoA … Episode Transcript … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy … itself medicine, but the coding within the DNA codes for proteins that do the chemistry that put molecules together … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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