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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … ( https://ror.org/04xm1d337 ) and the Environmental Molecular Sciences Laboratory ( https://ror.org/04rc0xn13 ), …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great … genome mining software we mentioned: “ EvoMining reveals the origin and fate of natural product biosynthetic …

… of uncultivated viral diversity, characterization of molecular mechanisms involved in virus:host interaction and …   15 , 1569–1584 Roux, S. et al. (2019) Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell . … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with metabolomics … is providing essential tools for exploring the molecular basis of complex biological systems, driving innovations in …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … Novel approaches are being explored to predict microbial lifestyles using AI-driven analysis of such datasets. The … catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … I got the chance to do genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… diversity and integrating various data types to explore the molecular mechanisms behind phenotypic evolution. It also … and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom …