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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … renewable energy and agricultural productivity. Research spans diverse areas — from understanding how terrestrial … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … we were able to capture both plant and fungal expression patterns in root cross-sections. … 10.1038/s41579-020-0381-4 … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

Brachypodium model system traces polyploid genome evolution. Flowering plants abide by the concept, … plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … evolution of polyploidy.” Evaluating Polyploid Genomes in a Pan-genomic Context For the study, partly enabled by the …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … , which is a machine learning tool that tries to look at patterns of Pfams through a genome and predict where regions …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … and produce valuable metabolites. The program seeks to expand our understanding of algal biology using genomics and …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … the type of work or specific proposal to be covered under the Agreement. The signing official must have the … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … to find natural products that may have been missed by companies like Pfizer or Wyeth or that because they probably … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …