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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …
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Environmental Genomics Group
… of microbial communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics … and adaptation, ultimately informing strategies for environmental monitoring, bioremediation, and the discovery … able to quantify isotope incorporation across a range of environmental conditions through metagenome-assembled …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … of relationships between microbes and their hosts. Our work reveals how these interactions shape ecosystem function, genomic innovation and environmental adaptation. …
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Publications
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genomes (MAGs), and 40,000+ metagenomes along with curated environmental- and other metadata to enable comprehensive … Publications … research experience "light" and... they're getting a publication at the end. " — Professor Matt Escobar,  CSU San …
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Pangenomics reveals alternative environmental lifestyles among chlamydiae
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Microbiome Data Science Team
… efforts include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing … Neri U. et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell . … 362(6416):839-842. Duerkop BA, et al. (2018) Murine colitis reveals a disease-associated bacteriophage community.  Nat …
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Mission
… research community in studies of complex biological and environmental systems. We optimize our service to the … sugarcane, rapeseed/canola, palm oil). Projects focused on environmental treatment, mitigation, or pollution, including … Mission Areas.  Information about DOE’s Biological and Environmental Research program mission can be found at …
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Viral Genomics Group
… and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both … infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … A.P., et al. (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell 185, 21. …
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Plant Program
… soils, interacting with other organisms, and adapting to environmental changes. The program lays the groundwork for … energy feedstocks. It also tackles challenges posed by environmental change, focusing on plant resilience — … into plant-microbiome interactions, focusing on how environmental stress and microbial communities affect plant …
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FICUS
… provides customized analysis, the JGI also participates in publication of results. … Accessing NEON’s Environmental Sample Archives, Applying JGI and EMSL Omics … representative samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… Francisco Barona-Goméz, or Paco, as he prefers to be known among friends in natural products. He’s from Langebio in … they don’t tend to be exposed to many dramatic changes, environmentally speaking. It’s hard to imagine that there … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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