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… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … The research efforts of the group have concentrated in demonstrating the power of data science in tackling grand …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses … bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics … While an ever-increasing number of phage and virus genomes have been … our understanding of the impacts of these viruses on microbiome processes is still limited. One key challenge is …

… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of … Biological and Environmental Research (BER), a program within the DOE Office of Science. …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to … of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding … are being explored to predict microbial lifestyles using AI-driven analysis of such datasets. The program also …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of the problem, and then how machine learning, because it feeds on so much data, right, to learn features of interest. … archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes that were …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …

… AI-ready data and professional expertise to support the global research community in studies of complex biological and environmental systems. … managing our people and resources. Our vision is to lead AI-driven genomic innovation to advance biotechnology.   … large-scale genomic discoveries, data integration, and AI-driven analyses that convert biological information into …

… Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding … of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial … The Metabolomics Program is focused on understanding the critical roles of metabolites in living systems, …