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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … to the work. The JGI has significant experience and capabilities in the analysis, annotation, comparative …
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Plant Program
… core, the program investigates photosynthesis — the process that transforms solar energy into chemical energy — and its … relationships as well as insights into clade-specific novelties and expansions.  … Brachypodium distachyon is an … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Metabolomics Program
… genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables … transformations, pathways, and how changes in metabolism can affect ecosystem functions. The Metabolomics Program … matches associated with genes.  … Metabolomics Offerings & Capabilities … Metabolite, Annotation and Gene Integration … …
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Webinars on Offerings & Capabilities
Below are a list of webinars that can help you through the submission process by better understanding the capabilities and resources available for your project. Watch …
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Microbiome Data Science Team
… of the functional dark matter as well as the development of novel methods to enable large-scale comparative analysis, … (2016) Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs.  Nature Commun. … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Partnerships: Adopt-A-Genome
JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … of the denitrifying thermophile Geobacillus thermodenitrificans subsp. calidus DSM 22629T. M Snook, et. al.  2024 . …
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Metagenome Program
… the Program aims to unlock the fundamental principles that govern ecosystem processes. This research provides … Integrating metatranscriptomes and metagenomes can, for instance, deepens our understanding of microbial … most pressing challenges. … Exploration of phylogenomic novelty: Advances in metagenomic sequencing, assembly and …
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FICUS
… a unique opportunity for researchers to request the capabilities and expertise of multiple DOE National User … proposals within the focused topic areas that can be completed on an accelerated timeline as compared … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Natural Prodcast Episode 17: Cassandra Quave
… use successfully, hopefully, in the future even more so as novel therapies. And that’s how I got on that path of … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … at Georgia Tech, where we’re proposing to take this newly emerging cryo-EM MicroED technology, a massive leap forward …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to convert … accessible Synthetic Biology Informatics Group : a team that develops data science tools for workflow management and novel automations for DNA design, assembly and analysis …
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Mission
… the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional expertise to … and synthesis, metabolomics and computational analysis that enable systems-based scientific approaches to these … Creek, California, to consolidate activities. The significant economies of scale achieved in doing so enabled the JGI …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their science by generating …
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