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… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model … novelty: Advances in metagenomic sequencing, assembly and binning have enabled reconstruction of complete or …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … and debate about the data. It is also a place where the community can upload new data for use by scientists and the …

… … DAN: You’re listening to the US Department of Energy Joint … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … or MAGs. So these are genomes that were assembled from metagenomic sequence, metagenomic sequence being taking a … that in order to assemble these genomes, you go through a binning process. So you look at the DNA itself and try to …

… viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (2020) Advantages and limits of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) Schulz et al. …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

The IMG group owns and maintains integral components of JGI’s production … them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The …