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… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … The Metagenome Program focuses on the high-throughput sequencing … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … applications. By recovering population genomes from metagenomes, we gain insights into microbial interactions, …

… The purpose of this policy is to establish communication norms around JGI contributions, ensure … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing …

… Biology is currently experiencing a revolution brought on by rapid developments in genomics … discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … and host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The … and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes that were assembled from metagenomic sequence, metagenomic sequence …

… Our research is focused on the discovery and characterization of … data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research …

… conversation with Aaron Puri. He is an Assistant Professor from the Chemistry department at the University of Utah, so … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got … Episode Transcript …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript …

… DAN: You’re listening to the US Department of Energy Joint … week, we have our conversation with Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time … the end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  …