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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … the first analysis of data produced at the facility, provided this is done in a timely fashion. The publications …

… “Adopt a Genome” is an informal program for faculty to “claim” the … genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

Below is a table of standard product offerings, including a description of the product and deliverables as well as … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … smRNA sequencing is no longer supported. For annotation: de novo assembly. For counting: text file of gene counts …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

With collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … large-scale single genomes, based on the JGI assembly tool meraculous. It is now available for both eukaryotic and …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support … research and sequence-based science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … clusters. And then they sequenced a really nice and good assembly. They were able to assemble a really high quality …