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Publication Policy
JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …
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Mechanistic insights into consumption of the food additive xanthan gum by the human gut microbiota
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … and skills necessary to extract meaningful biological insights from sequence data, employing IMG data and tools …
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Publications
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Natural Prodcast Episode 17: Cassandra Quave
Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … always wanted to write a book but it’s really hard to break into that area. I mean you have to secure an agent and … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Microbiome Data Science Team
… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses … Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from uncultivated genomes of the global human gut … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Single Cell Research Group
… means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to decipher … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 10: A Primer on Genome Mining
DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … worked is people who were trying to find gold would go out into the hills. And they knew from example that gold is a …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … for every episode we put out. I actually put a lot of time into preparing those transcripts, so I hope somebody’s going … natural product – they also often surprise us by giving us insights, inspires us to discover the fundamentals and then …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, with …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … marine natural products chemist, Richard Moore, and get into seaweed, robots, algae, and biocatalysis — and he makes … called Salinospora . This new genus was discovered by friends and colleagues at the Scripps Institution of …
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Natural Prodcast Episode 6: Marc Chevrette
So maybe we could start with that background – what got you into secondary metabolism, besides being forced to work with … other is chemistry. So understanding how that happens at a mechanistic level is where we want to go in the next couple years. And hopefully, some of the insights that we glean from that will be broadly applicable …
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