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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in …
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Metabolomics Program
… uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding … genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables … and ecosystems. Identifying and analyzing primary and secondary metabolites helps uncover their roles in processes …
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Secondary Metabolites Advisory Committee
The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. The Committee is chartered to render advice, …
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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … se, how do you see genome mining and looking for secondary metabolites in the genome as relevant to the JGI mission? … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural … about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural … gene clusters. And also correlating these gene clusters to metabolites. So knowing, OK, which metabolites are actually …
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Natural Prodcast Episode 14: Nigel Mouncey
… the Director of the Joint Genome Institute and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Plant Program
… which can reduce dependence on fertilizers. The study of secondary metabolites enhances our understanding of natural compounds … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… about natural products and the science and scientists of secondary metabolism. Hey everybody, this is Dan with … papers and one seminal book, which talks about this idea of linking natural products to the evolutionary forces that … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Natural Prodcast Episode 12: Nadine Ziemert
… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 … ZIEMERT: Big picture, I want to understand how secondary metabolites evolve– who makes them, how do they spread, why … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… interview chairs and I talk about SMC – which is the new Secondary Metabolism Collaboratory data portal I’ve been … Scripps. So we’re looking at biosynthesis of marine fungal metabolites. We’re also looking– now we’re started a newer … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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