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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … help. … All publications using JGI data produced under a specific non-FICUS proposal(s) and authored by that …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … and machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for …

While uncovering the metabolic potential of uncultivated lineages is of high value to establish models and … single cells are characterized and selected as based on a specific functional trait or phenotype of interest, prior to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … and Appendix. An Appendix identifies the type of work or specific proposal to be covered under the Agreement. The … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… are shaping each part of the metabolic network in each specific organism. Really, what matters is the forces that … talk about conserve between or within a particular genomic lineage. So there is no doubt that if you look into all the … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… for and explore the chemistry of quorum sensing systems, specifically the acyl homoserine lactones.  If you listened … So that’s– so that could be an example of convergent evolution, but just speculating there. But it’s interesting … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … genome sequencing of underexplored bacterial and archaeal lineages that are important for bioeconomy applications. By … families, and pathways, enhancing our understanding of evolutionary diversification and microbial diversity. Learn …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome Program combines … searches to expand representation of uncultivated microbial lineages. Charting viral ‘dark matter’:   Viruses are …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … coding genes that are signatures for the presence of a specific type of biosynthetic gene cluster. And antiSMASH … in more detail. Especially if you want to look at the evolution of these gene clusters, for example, you really …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of a polyketide synthase. Each domain catalyzes some specific reaction. And so I would take a collection of … archaeal orders as seen on the phylogenetic tree, with new lineages of uncultivated genomes from the GEM catalog (in …