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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … for your proposal using your proposal's WIP ID (ex. 503582). Click on the correct proposal name on your search …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial research that …
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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based … to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … evolutionary time scales.The Metagenome Program combines large-scale, time-series metagenomic data with detailed …
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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … enable the exploration and identification of small and large structural variation — this variation drives major … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Publications
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Community Science Program
Science Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … more customized analysis, the JGI also participates in publication of results. See more details on our Review …
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Large variability of bathypelagic microbial eukaryotic communities across the world’s oceans
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … to try and create an open source database of all known microbial natural products. So if you think about natural … sophisticated tools, because now we had a very reasonably large set of articles which had been manually curated for …
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … So taxol is a natural product, a cancer drug. It was the largest selling drug back in the early 2000s for cancer. You … set of shared traits that everyone has but there’s still variability. Although this secondary metabolism, you take it …
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