Search

The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial research that drives …

JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … genes, some of these enormous genes that encode these very large enzymes. And I was like, OK, wow, these are really … know what they’re looking at, and hard to do on a large scale. And so– Marnix Medema: But in the end, I do feel that …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research … the deployment of computational workflows at peta- and exa- scales on multicore and many core architectures with the …

Below is a brief description of the process needed to prepare and ship samples for … to shipment: Importance of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … interactions, over ecological and evolutionary time scales.The Metagenome Program combines large-scale, time-series metagenomic data with detailed …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … Genome Institute provides advanced genomic capabilities, large-scale data and professional expertise to support the global …