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… The Community Science Program Large Scale call is focused on genomic science projects that … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … For the CSP Large Scale call, a Letter of Intent (LOI) is required by …

… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial research that drives … particularly for uncultivated microorganisms, by sequencing large populations of bacteria and archaea in their natural …

… The purpose of this policy is to establish communication norms around … JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Upon request, JGI staff will provide Users with a list of contributors and their corresponding ORCiD and relevant …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … genes, some of these enormous genes that encode these very large enzymes. And I was like, OK, wow, these are really … know what they’re looking at, and hard to do on a large scale. And so– Marnix Medema: But in the end, I do feel that …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … to shipment: Importance of Sample QC Sample Quality and Contamination JGI’s Genomic DNA Sample QC Protocol JGI’s …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …

… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … evolutionary time scales.The Metagenome Program combines large-scale, time-series metagenomic data with detailed …

… (Trillions) Operating Hours Goal  Actual Total*   Actual % of Goal   Goal (hours)**   Actual Total   Actual % Goal   FY … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. … the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new …