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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … of collaborators and users. For example if, by agreement with the collaborator, JGI staff take a lead role in the … … Any publication using data from the “Facilities Integrating Collaborations for User Science” (FICUS) …
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Fungal & Algal Program
… to play a vital role in carbon cycling, biodegradation and biogeochemistry. This research helps translate their genomic … carbon management, and environmental sustainability. Fungi, with million species, are essential for ecosystem … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …
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Data Policy
… through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) … visible and available in JGI systems. Users not involved with the proposal under which the data were generated (e.g. … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Publications
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Metagenome Program
… encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. … microbial metabolism and activity in natural environments. Integrating metatranscriptomes and metagenomes can, for … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …
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Integrating biogeochemistry with multiomic sequence information in a model oxygen minimum zone
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Partnerships: Adopt-A-Genome
… faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call … applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Natural Prodcast Episode 23: Aaron Puri
I really do want you all to hear this great conversation with Aaron Puri. He is an Assistant Professor from the … of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Special Initiatives & Programs
… are NOT eligible for BERSS support through the JGI (with the exception of DE-FOA-0003453, which is eligible for … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … CABBI researchers will develop fuels and products by integrating three highly interconnected DOE priority areas …
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Natural Prodcast Episode 15: Katherine Duncan
… because I really enjoyed the review that you wrote with Marnix on putting that stuff together. It’s been kind … intersection of how I approach natural products, is kind of integrating the biology and the chemistry. And then, yeah, I … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Natural Prodcast Episode 22: Alison Narayan
… earlier this year. And today we have our conversation with Professor Alison Narayan, from the University of … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh … the substrate scope of many enzymes. And so we have limited information. There’s a lot of work to do, and that makes …
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