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Publication Policy
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … and skills necessary to extract meaningful biological insights from sequence data, employing IMG data and tools …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… a slacker. We’ve had all kinds of chaos here between the pandemic. I had an international move. You had an interstate … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … worked is people who were trying to find gold would go out into the hills. And they knew from example that gold is a …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to … that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, with … based on functional traits. These advancements provide new insights into microbial ecosystems.  The Program also aims …
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Publications
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …
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Metabolomics Program
… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, … cutting-edge metabolomics with genomic data to gain insights into how small molecules function within plants, …
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Microbial Program
… cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … that are important for bioeconomy applications. By expanding our knowledge of microbial functions and …
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Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to decipher … Stepanauskas R., Rubin E.M., Hugenholtz P. & Woyke T . Insights into the phylogeny and coding potential of …
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New Lineages of Life Group
… machine learning to identify new divergent lineages and expand the Tree of Life. We then investigate the coding … between viruses and cellular life, providing unique insights into viral evolution and complexity, and encode for a … lakes and hyperthermal springs. This research provides insights into the limits of life and potential for life on …
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Natural Prodcast Episode 14: Nigel Mouncey
… with Beecham and SmithKline and became a much bigger company. But, yeah, he was mucking around with Bacillus spores … thought I’d take an academic job then, but I ended up going into industry. Saw a job at Roche, and that was to work with … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … I wanted to start, maybe just by asking you how did you get into the field of natural products?   NANCY: Yeah, that’s a … my Peace Corps volunteer stint, and that it was in all the maize. So the main food that you ate was called Papa, which …
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