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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … to maximize the impact of user research. The crucial elements are  proposal Award DOI(s), JGI’s ROR ID number, …
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Hybridization History and Repetitive Element Content in the Genome of a Homoploid Hybrid, Yucca gloriosa (Asparagaceae)
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … or fosmids, or whatever. And you would scan those pieces by hybridization or maybe sequencing if you were rich enough. … or a non-ribosomal peptide synthase – they’re a little bit repetitive. And so they don’t end up being assembled …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Publications
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to … along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial …
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Mission
… and bioproducts. Such biofuels would ideally offer energy content on par with gasoline, diesel, and aviation fuels, … and microbial communities significantly contribute to element and nutrient cycling, particularly those found in … miles of land), and the subsurface. … About Us … JGI History … Biological and Environmental Research Program …
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Natural Prodcast Episode 12: Nadine Ziemert
… a really valuable piece that shaped my thoughts about the history of genome mining and the directions it might take in … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … similar within the fosmid library. And then we did, still, hybridization. We used probes from the other genome, and we …
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DNA Synthesis Program
Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … … Mycocosm … Phytozome … Inventory of Composable Elements … gRNA-SeqRET … DNA Synthesis Program in Detail … …
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Natural Prodcast Episode 8: Eric Schmidt
… predators from eating them. And so there’s a long history. There’s, I think, 60 years of history now of people … be related to each other, even though they had common elements. And so we really needed to get together. You know, … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … outside repositories (e.g. the Inventory of Composable Elements (ICE) repository and/or DNASU Plasmid Repository) …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …
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