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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … of fungi and algae. These organisms play a critical role in ecological processes such as carbon cycling, biodegradation … while also encouraging community engagement and data exchange. … Mycocosm … Phycocosm … Fungal & Algal Program in …
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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … of thousands of new viral genomes and their predicted hosts (Nature 2016, Science 2017, Nature Microbiology 2018), … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Publications
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Natural Prodcast Episode 10: A Primer on Genome Mining
And so, understanding those broader environmental and ecological roles for secondary metabolites is what our … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … metabolism genes don’t look like the genes in their host. And so, sometimes those kinds of things get lost in …
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Fungal & Algal Program User Advisory Committee
The Fungal & Algal Program Advisory Committees is chartered by …
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Host genotype controls ecological change in the leaf fungal microbiome
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Viral Genomics Group
… group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … (5), 255-255 Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 …
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Mission
… by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … DOE science mission areas of bioenergy and environmental microbiome processes.  Among the JGI’s largest dedicated … development. Develop an understanding of microbial and fungal metabolism necessary to design communities, new …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … public datasets.  … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, …
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Metabolomics Program
Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … It also enables exploration of energy and nutrient exchange, as well as microbial and plant responses to … and bioenergy development. … EcoFABs:  For studying microbe-host (or plant-microbiome) interactions under controlled …
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