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… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …

… through end-to-end automation — and further advancing sequence applications, single cell genomics, biodesign, and …   Overview of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. This includes advanced sample management (quality assurance/quality control [QA/QC]), large-scale …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … and bioeconomy applications. The program provides high-quality, large-scale genomic data to advance microbial … and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for uncultivated …

… library preparation, Biodesign and pathway engineering Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… Below is a brief description of the process needed to prepare and ship samples for … protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting step for many projects at … collection and storage (from PacBio) Best practices for High Molecular Weight DNA extraction and quality control …

…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by … group dedicated to user project design, assembly, and quality control Strain Engineering Group : a research & …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … but in subtle ways that affect fitness. And so, doing a high level kind of analysis, you just might not be able to …