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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … following the guidelines below.  … If you use data from 3 or fewer JGI proposals, include those DOIs in the auspice …

And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … metabolism you know those numbers are still actually pretty high in terms of understanding from just sequence gazing … Simple Rules” article on increasing computational skills among biologists JGI CSP Proposal: Metagenomic mining of …

The focus of this group, in recent years, has been to bring … expression and functional exploration.  The developed strains represent an additional phase of user-accessible … into a taxonomically diverse suite of microbial chassis strains for elevated opportunity for expression. Research …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … available datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ …

… and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  … can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: … RNA Extraction …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … so I hope somebody’s going to find them useful! DAN: Among many other things, Ben is maybe best known as an … major discovery from the genome sequencing of this Actino strains, instead of knowing some of the organism can produce …

U.S. Department of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and synthesis, … areas of bioenergy and environmental microbiome processes.  Among the JGI’s largest dedicated partnerships are the DOE … and fungal metabolism necessary to design communities, new strains, or enzymes to convert plant biomass components into …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … terms and conditions in the User Agreement.  These include, among others: indemnification, patent rights, rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… what we’re trying to do right now is develop the chassis strains that then we can port things into as well. DAN: Give … we’ll say methyl so we call them methylotrophs [ muh-thigh-luh-trophs ]. This is like, every square is a … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …