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The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, …

… of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C Abergel, T Woyke (2022) Giant virus biology and diversity in the era of …

… ( GEBA-type strains project ), the delineation of host-virus interactions, the exploration of the functional dark … Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host interactions through global … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and … associated with microeukaryotes. The program also studies giant viruses. Key research areas include terrestrial …

K. T., Eloe-Fadrosh E. A., Kyrpides N. C., Woyke T . Giant virus diversity and host interactions through global … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and skills …

The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … DNA synthesis and assembly group: Our production group operates as user facility that aims to provide access to …

Software engineers in the Synthetic Biology Informatics Group … and maintain software that support the JGI’s Synthetic Biology Program .  Representative software includes: …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … can be found in Yu et al, APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 1253–1262, 70:3 ALISON TAKEMURA: And so did … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at … big (or small) can tailed phages be?  Nature Reviews Microbiology.   19 , 407 Berg, M. et al. (2021) Host population … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …