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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to …

… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. … lineages, and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture …

… So, the DNA sequence isn’t itself medicine, but the coding within the DNA codes for proteins that do the chemistry that … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride …

… and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … and identification of small and large structural variation — this variation drives major phenotypic differences in plants and … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the …

… The program provides high-quality, large-scale genomic data to advance microbial research that drives … management. The program aims to generate high-quality genomic datasets, particularly for uncultivated … cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single cell …

… a group of genes into maybe the “easiest” organism to grow within that same genus. And so that’s what we’re trying to … would envision that microorganisms have evolved multiple variations of these compounds. And so if you’re trying to … them I think. Because E. coli does not have the substrate pool. DAN: The weird precursors, yeah. AARON PURI: So in …

… Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and metabolomics data, shedding light on microbial …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … ecosystem-level impacts of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team … ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question in natural …

… Nadine? NADINE ZIEMERT: Yes, perfect. I’ve heard it in all variations, and I think that was perfect. DAN UDWARY: I … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … I think GTDB also started that. But I think taxonomy and genomic data are still kind of a mess. DAN UDWARY: Yeah, …