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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … The program provides high-quality, large-scale genomic data to advance microbial research that drives … rich data such as inferred host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and expand the Tree of Life. We then investigate the coding potential to find novel functions that may impact microbiome … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … and biogeochemistry. This research helps translate their genomic potential into practical applications, including …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … provides insights into microbial diversity and metabolic potential, with implications for energy production, … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … Biotech .  37 , 29–37 Roux S, et al. (2016) Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, …

… gap. A primary goal is to get  insights into the coding potential of candidate phyla  to decipher their possible … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …