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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and biogeochemistry. This research helps translate their genomic potential into practical applications, including … cutting-edge sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. …

… that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … would have really done a somewhat exhaustive chemical analysis of a bacterium that they’re interested in, usually …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … The program provides high-quality, large-scale genomic data to advance microbial research that drives …

The User Support Analysis group provides computational analysis for new … focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data …

… and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is advancing … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …