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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the … that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … sequence data, employing IMG data and tools for comparative analysis, visualization and interpretation using public …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm …

… Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and seeking to interpret function from BGCs. It’s a long, wide ranging conversation and I’m so happy we got the chance … had just not  been released yet. And there was also some transcriptome data. And my first task during that project …

… and environmental samples by using advanced computer analysis coupled with liquid chromatography mass … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and prediction The JGI works in partnership with Berkeley Lab’s …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … it is that secondary metabolism is ancient and, therefore, widespread. So if secondary metabolism was there when– and …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, … as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified using LC-MS/MS …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … see if you can see patterns and if you can actually make predictions. And then you get excited if you can make …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …

… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … The DNA Synthesis Program plays a central role in advancing functional genomics, focusing on developing … project. These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA …