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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

… “Adopt a Genome” is an informal program for faculty to “claim” the … that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … it is that secondary metabolism is ancient and, therefore, widespread. So if secondary metabolism was there when– and …

… exposure to working with Streptomyces, learning more about genome mining, as well as isolation and a little bit of … unknown. And so we've done the sequence similallity network analysis where we look for other receptors with sequence … not all coming from actinos. So that, we have a little bit wider spread since we're just doing bioinformatic searches. …

The User Support Analysis group provides computational analysis for new … for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …

… focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes …

The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling …

… this identification, metabolomics enables functional genome annotation, improves understanding of the role small … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, … as different types of environments (e.g. soil, lake).  A wide range of metabolites are identified using LC-MS/MS …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and a lot of the really important recent events in data analysis and secondary metabolism over the last decade or … and seeking to interpret function from BGCs. It’s a long, wide ranging conversation and I’m so happy we got the chance …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Dr. Schmidt is a natural products chemist who works in a wide variety of marine organisms, including sponges, … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …