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…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … The Secondary Metabolites Program targets the vast and …

… Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … essential tools for exploring the molecular basis of complex biological systems, driving innovations in …

… I’ve been working with him on as an exploration into the secondary metabolism of some more novel marine bacteria. You … it did. And of course, we now know that the ocean is as complex or even more complex, chemically, than any of the … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …

… strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior.  Through … this identification, metabolomics enables functional genome annotation, improves understanding of the role small …

… recognized and credited for their work, while also adhering to the authorship policies of the journal in which the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …

… The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. …

… was really before– or kind of around about when the first genome sequencing was done. But natural products– marine natural … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to … molecular networking, and the future of integrated secondary metabolism data. Links and Notes Dr Duncan’s group …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to improving our …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … really the same kind of thing. Before the age of genome sequencing, we had to basically break up the pieces of DNA …