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UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … BARONA-GOMEZ: I think that the very first thing that got us into this is that we should, in any case, use definitions … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

The Metagenome Program uses advanced sequencing technologies to … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model … in unexpected microbial clades. We leverage  genome-resolved metagenomics and targeted gene searches to expand …

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

… cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … marine natural products chemist, Richard Moore, and get into seaweed, robots, algae, and biocatalysis — and he makes … Patrick would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … or MAGs. So these are genomes that were assembled from metagenomic sequence, metagenomic sequence being taking a …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … (2023) Unraveling the functional dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their … and follow the metadata requirements for integrating data into IMG/M (see IMG/M submission site ). The Integrated …