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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …
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Plant Program
… for key plant species, enhancing our understanding of plant diversity and integrating various data types to explore the … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Natural Prodcast Episode 10: A Primer on Genome Mining
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is …
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Metagenome Program
The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … using advanced sequencing technologies to explore microbial diversity — with an emphasis on bacteria and archaea, and … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal …
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Publications
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Natural Prodcast Episode 13: Francisco Barona Goméz
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … is that you could, therefore, expect a lot of chemical diversity. So many compounds will fulfill the same function. … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the …
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Genome diversity in Brachypodium distachyon: deep sequencing of highly diverse inbred lines
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … with animal metabolism itself, and it’s really amazing what diversity there is in animals. I think, even despite the … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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